Browse Proteins

Explore nucleic acid-binding proteins and their associated structural information.

6 proteins
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Showing 6 of 6 matching proteins
Reviewed
tRNA-related enzyme
Organism
Aquifex aeolicus (strain VF5)
UniProt ID
O66728
Related PDBs
4wc0,4wc1
InterPro family
IPR052390: tRNA Nucleotidyltransferase/Poly(A) Polymerase
InterPro domains
IPR000644: CBS domain; IPR002646: Poly A polymerase, head domain; IPR003156: DHHA1 domain
Matched classes
DNA/RNA polymerase and replication protein [nucleotidyltransferase, poly(a) polymerase, polymerase] || tRNA-related enzyme [trna, trna nucleotidyltransferase]
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Reviewed
tRNA-related enzyme
Organism
Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
UniProt ID
O28126
Related PDBs
1r8c,1r89,1r8b,1ueu
InterPro family
IPR008229: tRNA nucleotidyltransferase, archaea
InterPro domains
IPR002934: Polymerase, nucleotidyl transferase domain; IPR006116: 2-5OAS/ClassI-CCAase, nucleotidyltransferase domain; IPR015329: tRNA nucleotidyltransferase, substrate binding; IPR048833: CCA-adding enzyme, C-terminal domain
Matched classes
DNA/RNA polymerase and replication protein [nucleotidyltransferase, polymerase] || tRNA-related enzyme [trna, trna nucleotidyltransferase]
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Reviewed
tRNA-related enzyme
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID
P07236
Related PDBs
4eo4
InterPro family
IPR002320: Threonine-tRNA ligase, class IIa
InterPro domains
IPR002314: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T); IPR004154: Anticodon-binding; IPR006195: Aminoacyl-tRNA synthetase, class II; IPR033728: Threonine-tRNA ligase catalytic core domain; IPR047246: Threonine-tRNA ligase, class IIa, anticodon-binding domain
Matched classes
RNA-binding / RNA metabolism protein [rna ligase] || tRNA-related enzyme [aminoacyl, threonine-trna ligase, trna, trna ligase]
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Reviewed
tRNA-related enzyme
Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
UniProt ID
P43912
Related PDBs
4yq4,4yq5,4ypy
InterPro family
IPR002649: tRNA (guanine-N1-)-methyltransferase TrmD
InterPro domains
IPR016009: tRNA methyltransferase TRMD/TRM10-type domain
Matched classes
tRNA-related enzyme [trmd, trna, trna methyltransferase] || DNA/RNA modification or nucleotide metabolism enzyme [methyltransferase]
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Reviewed
tRNA-related enzyme
Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
UniProt ID
O58843
Related PDBs
1it7,1it8
InterPro family
IPR004803: tRNA-guanine transglycosylase; IPR004804: tRNA-guanine(15) transglycosylase
InterPro domains
IPR002478: PUA domain; IPR002616: tRNA-guanine(15) transglycosylase-like; IPR004521: Uncharacterised domain CHP00451; IPR029402: tRNA-guanine transglycosylase, patch-forming domain C2; IPR032729: tRNA-guanine(15) transglycosylase, C1 domain
Matched classes
Nuclease / DNA-RNA repair enzyme [glycosylase] || tRNA-related enzyme [transglycosylase, trna, trna-guanine]
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Reviewed
tRNA-related enzyme
Organism
Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
UniProt ID
O28025
Related PDBs
3au7,4rvz,6agg
InterPro family
IPR024913: tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS; IPR053434: tRNA(Ile2) 2-agmatinylcytidine synthetase
InterPro domains
IPR004365: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type; IPR013696: TiaS, FLD domain; IPR053870: TiaS-like, TCKD domain; IPR055394: TiaS, C-terminal zinc ribbon domain
Matched classes
tRNA-related enzyme [agmatinylcytidine, tias, trna]
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